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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842303.1_cds_XP_016508354.1_21382
CDS Infomation

[gene=LOC107825935] [db_xref=GeneID:107825935] [protein=katanin p60 ATPase-containing subunit A-like 2 isoform X2] [protein_id=XP_016508354.1] [location=complement(join(16585..16718,17316..17538,18139..18240,18974..19134,20172..20256,20510..20576,20875..20982,21118..21183,21385..21443,21519..21653,23353..23391))] [gbkey=CDS]
Sequence

ATGGCCGACGAACCTGCGTTGACTCGCTGGTCCTTCCCGTTTGGGAGGAAGAAGGCTCCT
GCAACTGAGAATGGTGATGCTGTACAAAATGGAAATTCTTTGACGGTGACTGCAAATGGA
AATGGACATGTGCGGAACACTGCAGAATTGTCCATTTACGAGCAATATAATCAGGTTAAT
GGAGGCGCAGCACACTCTAATGGAGTTCAGTCTGTCGGAGTAGTTGGAAAACCGCAAAGA
TCTCTACTTCCCCCTTTCGAGTCTGCAGAAATGCGTGCTTTAGGAGAAAGTTTAAGCAGG
GATATTCTTCGTGGTAATCCAGATGTAAAGTGGGAGAGCATTAAAGGATTGGAGACTGCC
AAGCGTCTACTAAAAGAAGCAGTTGTAATGCCGATTAAATATCCAAAGTACTTTAAAGGT
CTTCTAACTCCATGGAAAGGTATCCTCCTTTTTGGCCCTCCAGGAACAGGAAAGACGATG
CTTGCGAAGGCAGTTGCAACTGAATGCAATACCACATTTTTCAATATCTCAGCATCATCA
GTTGTCAGCAAATGGCGTGGTGATTCTGAGAAATTGATAAAAGTGTTATTCGAGCTCGCC
AGGCATCATGCACCTTCAACTATCTTTCTAGATGAAATTGATGCAATTATCAGTCAACGT
GGGGAAGCACGTAGTGAGCATGAATCTAGTAGGCGTTTAAAAACAGAACTGCTCATACAG
ATGGACGGTTTGAATCGGACAGATGAACTTGTATTTGTTCTGGCAGCAACAAATCTTCCC
TGGGAACTGGATGCAGCAATGCTCCGTCGTCTTGAGAAGCGGATCCTTGTGCCCCTTCCG
GAGCCAGAAGCAAGGTGCGCCATGTTTGAAGAATTACTACCATCACTGCCTGAAGAGGAG
TCACTTCCATATGATTTATTGGTAGAAAAGACAGAAGGTTTTTCCGGTTCTGATATTCGG
TTGTTGTGCAAGGAGGCTGCCATGCAACCATTAAGACGTTTAATGGCAAAACTTGAAGAG
AAAGAAGAAGTGGTGCCTGAGGATGAGTTGCCCAACGTTGGACCAATAACTGTGAGAGAT
ATTGAGATGGCATTGAAGAACACTAGACCATCTGCACACCTTCATGCGCCGAGGTATGAC
AAGTTCAACTCGGATTATGGTAGCCAAGTGCTCCAGTGA

Peptide Sequence

PEP ID

XP_016508354.1
PEP Infomation

PREDICTED: katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Nicotiana tabacum]
Sequence

MADEPALTRWSFPFGRKKAPATENGDAVQNGNSLTVTANGNGHVRNTAELSIYEQYNQVN
GGAAHSNGVQSVGVVGKPQRSLLPPFESAEMRALGESLSRDILRGNPDVKWESIKGLETA
KRLLKEAVVMPIKYPKYFKGLLTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASS
VVSKWRGDSEKLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHESSRRLKTELLIQ
MDGLNRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARCAMFEELLPSLPEEE
SLPYDLLVEKTEGFSGSDIRLLCKEAAMQPLRRLMAKLEEKEEVVPEDELPNVGPITVRD
IEMALKNTRPSAHLHAPRYDKFNSDYGSQVLQ

Transcript Sequence

Gene sequence data has not been registered.